Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931379.1_cds_XP_016478207.1_69866
CDS Infomation

[gene=LOC107799584] [db_xref=GeneID:107799584] [protein=phosphoinositide phosphatase SAC6-like isoform X2] [protein_id=XP_016478207.1] [location=complement(join(1892..2001,2105..2213,2303..2402,3307..3405,3491..3561,3767..3844,3941..4027,5070..5176,5440..5520,5639..5672,5752..5808,5963..6020,6530..6621,6725..6852,7212..7295,7387..7534))] [gbkey=CDS]
Sequence

ATGATGGAGAAGGCAGATCCTTCACAGAAACTATATACAAGGATGCGACTTTGGGAATTC
CCAGATCAGTATGTTGTTGAGCCTACTGATGGATCCTGTGGTTCATGTTTGGAGATTAGT
CGCATGGATGGATCTATGAAACTAATAGATGAGGTTCCAGAATGCAGTTCGGTTCGTGTT
CCCAAAATTCAGACAGTATTTGGTGTTATAGGCATGCTAAAGCTTTTGGCTGGTTCATAT
TTACTTGTCATAACGGAACGGGAATGTGTGGGATCTTACTTCGGGCACCCTATCTTTAAA
GTTTCATCAATGAAATTTTTTCCTTGCGATCACTCTCTCAAGAACTCTCCTGCTGAACAG
AAAAACATGGAAGCTCAGTTTTTGGCACTGCTTAACGTTGCAGAGAGGACTCCTGGTCTG
TACTTCTCTTATGATGTCAATTTAACATTAAGTGCTCAACGACTGCATGATTTGGGTGAT
GAATCCAAGTTGCTTCCTCTATGGAGACAAGCAGACCCTCGATTTCTTTGGAACAACTAT
ATGATGGAAGTGATGATAGATAACAAGCTTGACCCATTCTTGCTTCCTGTCGTCCAAGGC
AGTTTTCACAATTTTCAATCTGCAATTGGAAAAGACATCATTGATATTACGCTGATTGCA
AGGAGATGCAACAGGAGAACTGGCACTCGAATGTGGAGAAGAGGGGCTGATTCTGATGGA
TTTGTTGCAAATTTTGTGGAAAGTGAGCAAATTATCCAGATGAAAGGGTATACAGCATCA
TTTGTTCAGGTCAGAGGGTCAATCCCATTACTATGGAATCAGATTGTTGATTTGACATAT
AAGCCCAAGTTTGAGATAGTGAGAATTATAGAAGCACCTAGAGTTGTTGAGCGACACTAC
CTGGATCTGAGAAAGAAGTATGGAAATGTTTTATCAATTGATCTTGTCAACAAGCATGGA
GGAGAAGGACACCTAAGTGAAAAGTTCGCGAATGCAATGCAGCATGTTGTTGGTGAGGAT
GCGAAATACTTGCACTTTGATTTTCACCACATATGTGGGCATGTTCATTTTGAGCGTCTT
TCTATCCTCTATGATCAAATTGAGGATTTCTTCATTAAAAATAGGTACTTTCTATTAAAT
GAAAAAGGTGAGAAAGTTGAGCTGCAACTTGGAGTTGTGAGGACCAACTGCATTGACTGC
CTAGACCGTACAAATGTAACTCAGAGCATGCTAGGTCGGAAAATGCTGGAATTCCAGCTC
AGACGACTTGGTATTTTCGATGCTGAAGAAACTATTAGCTCACACCCCAACCTTGATGAA
AGCTTCAAAATCTTGTGGGCCAACCATGGGGATGATATAAGCATCCAGTACTCTGGTACT
CCAGCTTTAAAGGGAGATTTTGTCAGGTATCGACTTTCTTGTTCTGCTGAAATAGAAAAA
TGA

Peptide Sequence

PEP ID

XP_016478207.1
PEP Infomation

PREDICTED: phosphoinositide phosphatase SAC6-like isoform X2 [Nicotiana tabacum]
Sequence

MMEKADPSQKLYTRMRLWEFPDQYVVEPTDGSCGSCLEISRMDGSMKLIDEVPECSSVRV
PKIQTVFGVIGMLKLLAGSYLLVITERECVGSYFGHPIFKVSSMKFFPCDHSLKNSPAEQ
KNMEAQFLALLNVAERTPGLYFSYDVNLTLSAQRLHDLGDESKLLPLWRQADPRFLWNNY
MMEVMIDNKLDPFLLPVVQGSFHNFQSAIGKDIIDITLIARRCNRRTGTRMWRRGADSDG
FVANFVESEQIIQMKGYTASFVQVRGSIPLLWNQIVDLTYKPKFEIVRIIEAPRVVERHY
LDLRKKYGNVLSIDLVNKHGGEGHLSEKFANAMQHVVGEDAKYLHFDFHHICGHVHFERL
SILYDQIEDFFIKNRYFLLNEKGEKVELQLGVVRTNCIDCLDRTNVTQSMLGRKMLEFQL
RRLGIFDAEETISSHPNLDESFKILWANHGDDISIQYSGTPALKGDFVRYRLSCSAEIEK

Transcript Sequence

Gene sequence data has not been registered.